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DNA
Plattform Amplification Step Sequencing Chemistry Average Read Length (bases) Run Time Reads per Run Bases per Run
Sanger 330XL Yes (PCR) Chain termination by dideoxynucleotides 400 to 900 20 minutes to 3 hours 96 1,900 to 84,000
Pacific Biosciences/ PacBio RS† No (single molecule) Real-time single-molecule sequencing reactions 1,500 (C1 chemistry) 2 hours 45,000 100,000,000
454 GS FLX Yes (emulsion PCR) Pyrosequencing detection of pyrophosphate release with incorporation of correct complementary base 700 24 hours 1,000,000 700,000,000
Ion Torrent (Personal Genome Machine, 318 Chip) Yes (emulsion PCR) Detection of pH change by semiconductor technology with incorporation of correct complementary base 200 2 hours 5,000,000 1,000,000,000
SOLiD 4 Yes (emulsion PCR) Sequencing by ligation using four fluorescently labeled di-base probes 50 paired end 14 days 1,400,000,000 120,000,000,000
Illumina/HiSeq 2000 Yes (bridge amplification PCR) Sequencing by synthesis using basespecific fluorophores and cyclic reversible-chain termination 100 paired end 3 to approximately 10 days 3,000,000,000 600,000,000,000
NGS Next Generation Sequencing
Quellen 1.) Stadler ZK, et al.:
Cancer Genomics and Inherited Risk.
J Clin Oncol 32(2014):687-698

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